|
|
| Distribution |
Debian experimental |
| Abteilung |
science |
| Quelle |
infernal |
| Version |
0.81-1 |
| Maintainer |
Debian-Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
|
| Beschreibung |
Infernal ("INFERence of RNA ALignment") is for searching DNA sequence
databases for RNA structure and sequence similarities. It is an
implementation of a special case of profile stochastic context-free
grammars called covariance models (CMs). A CM is like a sequence
profile, but it scores a combination of sequence consensus and RNA
secondary structure consensus, so in many cases, it is more capable of
identifying RNA homologs that conserve their secondary structure more
than their primary sequence.
.
The tool is an integral component of the Rfam database.
.
Users of this package should cite:
"Query-Dependent Banding (QDB) for Faster RNA Similarity Searches."
E. P. Nawrocki, S. R. Eddy. PLoS Comput. Biol., 3:e56, 2007.
|
| Abhängig von | libc6 (>= 2.7-1) |
| Offizielle Seiten |
Paket
Entwicklerinformationen
Bugs (Binärpaket)
Bugs (Quellpaket) |
| Download |
amd64 |
|
|
|
