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| Distribution |
Debian stable |
| Abteilung |
science |
| Quelle |
dialign-t |
| Version |
1.0.1-2 |
| Maintainer |
Debian-Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
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| Beschreibung |
DIALIGN-TX is a command line tool to perform multiple alignment of protein or
DNA sequences. It is a complete reimplementation of the segment-base approach
including several new improvements and heuristics that significantly enhance
the quality of the output alignments compared to DIALIGN 2.2 and DIALIGN-T.
For pairwise alignment, DIALIGN-TX uses a fragment-chaining algorithm that
favours chains of low-scoring local alignments over isolated high-scoring
fragments. For multiple alignment, DIALIGN-TX uses an improved greedy
procedure that is less sensitive to spurious local sequence similarities.
.
DIALIGN-TX has been published in Amarendran R. Subramanian, Michael Kaufmann,
Burkhard Morgenstern: Improvement of the segment-based approach for multiple
sequence alignment by combining greedy and progressive alignment strategies,
Algorithms for Molecular Biology 3:6, 2008
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| Abhängig von | dialign-tx-data (= 1.0.1-2), libc6 (>= 2.7-1) | | Provides | dialign-t, dialign-t-doc | | Ersetzt | dialign-t, dialign-t-doc | | Kollidiert mit | dialign-t, dialign-t-doc |
| Offizielle Seiten |
Paket
Entwicklerinformationen
Bugs (Binärpaket)
Bugs (Quellpaket) |
| Download |
amd64 |
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