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sigma-align: Simple greedy multiple alignment of non-coding DNA sequences

Distribution Debian stable
Abteilung science
Quelle sigma-align
Version 1.1.1-3
Maintainer Debian-Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Beschreibung Sigma ("Simple greedy multiple alignment") is an alignment program with a new
algorithm and scoring scheme designed specifically for non-coding DNA
sequence. It uses a strategy of seeking the best possible gapless local
alignments, at each step making the best possible alignment consistent with
existing alignments, and scores the significance of the alignment based on the
lengths of the aligned fragments and a background model which may be supplied
or estimated from an auxiliary file of intergenic DNA.
.
Sigma has been published in BMC Bioinformatics. 2006 Mar 16;7:143.
Abhängig vonlibc6 (>= 2.7-1), libglib2.0-0 (>= 2.12.0)
Offizielle Seiten Paket Entwicklerinformationen Bugs (Binärpaket) Bugs (Quellpaket)
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